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Agilent mRNA 表达谱芯片检测

在全基因组表达谱芯片检测领域,Agilent拥有丰富的产品线。真核生物检测芯片产品种类繁多,基本覆盖了常见的研究物种。博奥生物基于多物种的Agilent 全基因组oligo芯片为您提供全方位的检测服务。

检测原理| 技术优势| 产品列表| 数据分析|

 

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  • 探针特异性/灵敏度高:绝大多数探针都经过Agilent专利实验验证程序检验和优化,充分保证探针的特异性和灵敏度。
  • 芯片检测一致性高:Agilent全基因组表达谱芯片具有极高的检测重复性,充分保证检测结果的准确性和一致性。
  • 芯片更新便捷:Agilent全基因组表达谱芯片设计基于序列信息来自RefSeq、Goldenpath、Ensembl和Unigene 等知名数据库,充分代表基因和转录本信息;基于喷墨打印方式的芯片制备方式使得芯片版本更新更为方便。
  • 多种芯片格式:Agilent常用于表达谱的芯片格式主要有1×244K, 2×105K, 4×180K, 8×60K, 4×44K 和 8×15K降低了芯片成本,也方便研究者使用。
     

针对物种

芯片设计ID

芯片格式

探针/基因数量

数据库版本

Human

039494

8 x 60K V2

50,599 probes (8,971 lincRNAs)

RefSeq Build 50; Ensemble Release 52; Unigene Build 216; GenBank (April 2009); Broad Institute Human lincRNA catalog (Nov 2011) ; Broad Institute TUCP transcripts catalog (Nov 2011)

028004

8 x 60K

27,958 Entrez Gene RNAs7,419 lincRNAs

RefSeq Build 36.3 Ensemble Release 52 Unigene Build 216 GenBank (April 2009) Plus: novel content for lincRNAs (long intergenic noncoding RNAs)

V2: 026652

4 x 44K v2

34,127 Entrez Gene RNAs

RefSeq Build 36.3Ensemble Release 52Unigene Build 216GenBank (April 2009)

014850

4 x 44K

43,376

Goldenpath Ensembl Unigene Human Genome (Build 33)RefSeqGenBank

人外显子芯片Human Exon Microarray

028680

2x400K

27,696 Genes233,164 Exon probes

RefSeq Build 36.3Ensemble Release 52Unigene Build 216GenBank (April 2009)

028679

4x180K

20,411 Genes174,458 Exon probes

RefSeq Build 36.3, RSNM only

小鼠Mouse

028005

8 x 60K

39,430 Entrez Gene RNAs16,251 lincRNAs

RefSeq Build 37Ensembl Release 55Unigene Build 176GenBank (April 2009)RIKEN 3

V2: 026655

4 x 44K v2

39,430 Entrez Gene RNAs

RefSeq Build 37Ensembl Release 55Unigene Build 176GenBank (April 2009)RIKEN 3

014868

4 x 44K

43,379

UCSC mRNA known genesNational Institute on AgingGenBankUniGeneRefSeqRIKEN

小鼠外显子芯片Mouse Exon Microarray

028727

2x400K

33,795 Genes235,714 Exon probes

RefSeq Build 37Ensemble Release 55Unigene Build 176GenBank (April 2009)RIKEN 3

030493

4x180K

23,215 Genes165,984 Exon probes

RefSeq Build 37, RSNM only

大鼠Rat

028279

8 x 60K

30,003 Entrez Gene RNAs

RefSeq Build 36.2Ensembl Release 55Unigene Build 177GenBank (January 2009)

V3: 028282

4x44K v3

26,930 Entrez Gene RNAs

RefSeq Build 36.2Ensembl Release 55Unigene Build 177GenBank (January 2009)

014879

4 x 44K

43,379

UCSC GoldenpathGenBankUniGeneRefSeqEnsembl

拟南芥Arabidopsis

V4: 021169

4 x 44K V4

43,803

RefSeq (Release 30) Jul 2008UniGene (Build 67) May 2008TAIR 8 cdna, Apr 2008TIGR (Release 13) Jun 2006TIGR Plant Transcript Assemblies (Release 2) Jun 2006ATHI, Jan 2004

大麦Barley

021623

4 x 44K

43,803

RefSeq (Release 31), Sep 2008UniGene (Build 52), Feb 2008TIGR Plant Transcript Assemblies (Release 2), Jul 2008TIGR Gene Indices (Release 10), Jun 2006

Bovine

V2 :023647

4 x 44K V2

43,803

RefSeq Release 34, Mar 2009TIGR Release 12, Sep 2006UniGene Build 93, Sep 2008Btau 4.0

油菜(芸苔) Brassica

022520

4 x 44K

43,803

RefSeq (Release 31), Sep 10, 2008UniGene (Build 17), Aug 4, 2008TIGR Plant Transcript Assemblies (Release 5), Jun 1, 2007TIGR Gene Indices (Release 3.1), May 31, 2008

线虫C. elegans

V2: 020186

4 x 44K

43,803

WormBase 188, Mar 2008ENSEMBL (Release 49), Aug 2007UniGene (Release 37), Dec 2007RefSeq (Release 27), Jan 2008TIGR (Release 9), Sep 2004UCSC ce4 (Sanger W170), Jan 2007

Canine

V2: 021193

4 x 44K V2

43,803

RefSeq (Release 31), Sep 2008UniGene (Build 23), Feb 2008TIGR Gene Indices (Release 7), Jun 2006canFam2:Cf2, May 2005

Chicken

V2: 026441

4 x 44K V2

43,803

RefSeq (Release 38), Nov 2009Unigene (Release 41), Oct 2008Ensembl (Release 56), Sep 1, 2009TIGR GGGI (Release 11), Jul 2006UCSC mrna (genbank) Nov 6, 2009UCSC GalGal3Entrez gene, Dec 2009GO, Dec 2009

棉花Cotton

022523

4 x 44K

43,803

RefSeq (Release 31), Sep 10, 2008UniGene (Build 9), Nov 18, 2008TIGR Plant Transcript Assemblies (Release 3), Sep 28, 2006TIGR Gene Indices (Release 9), May 31, 2008

果蝇Drosophila

018972

4 x 44K

43,803

UniGene (Release 54), Dec 2007TIGR (Release 11), Aug 2006FlyBase (Release 5.4), Dec 2007ENSEMBL (Release 48), Dec 2007UCSC dm3 (BDGP Release 5), Apr 2006

大肠杆菌E. coli

020097

8 x 15K

15,208

TIGR Comprehensive Microbial Resources databaseK12-MG1655 (Version 1), Dec 2000O157:H7 VT2-Sakai (Version 3), Apr 2001CFT073 (Version 11), Aug 2003EDL933 (Version 2), Apr 2001

Horse

021322

8x15K

15,208

RefSeq (Release 30), Jul 2008UniGene (Build 9), Apr 2008UCSC mRNA, Aug 2008Ensembl (Release 50), Jul 2008UCSC equCab1, Jan 2007

稻瘟病菌Magnaporthe (V2)

015060

4 x 44K

15,170 M. grisea and 6,325 rice probes

RefSeq, 2003GenBank, 2003MGOS database, 2003

苜蓿Medicago

022524

4 x 44K

43,803

RefSeq (Release 32), Nov 20, 2008UniGene (Build 33), Dec 12, 2008TIGR Plant Transcript Assemblies (Release 2), Jun 05 2006TIGR Gene Indices (Release 9), Jun 26, 2008

疟蚊Mosquito

020449

4 x 44K

43,803

Refseq (Release 27), Jan 2008UniGene (Build 10,) Jan 2008UniGene (Release 54), Dec 2007TIGR (Release 11), Aug 2006Ensembl (Release 49), Feb 2008Entrez gene, April 30, 2008anoGam1 (MOZ2), Feb 2003UCSC dm3 (BDGP Release 5), April 2006

Porcine

V2: 026440

4 x 44K V2

43,803

RefSeq (Release 38), Nov 2009Unigene (Release 38), Oct 2009Ensembl (Release 56), Sep 1, 2009TIGR SSGI (Release 13), Jul 2006UCSC mrna (genbank) Nov. 6, 2009Entrez gene, Dec 2009

GO, Dec 2009

Rabbit

020908

4 x 44K

43,803

RefSeq (Release 29), May 2008UniGene (Build 11), Mar 2008Ensembl (Release 49), Feb 2008

恒河猴Rhesus Macaque

V2: 026806

4 x 44K

43,803

RefSeq (Release 37), Oct 2009Unigene (Release 13), Oct 2009UCSC MRNA, Oct 2009Ensembl (Release 56), Sep 2009UCSC RheMac2, Jan 2006

水稻Rice

015421

4 x 44K

43,803

National Institute of Agrobiological SciencesRefSeqGenBank 2007

鲑鱼Salmon

020938

4 x 44K

43,803

RefSeq (Release 29), Feb 2008UniGene (Build 20), Jun 2008TIGR (Release 14), Jun 2006

绵羊Sheep

019921

8 x 15K

15,208

RefSeq (Build 16), Mar 2008UniGene (Release 27), Dec 2008

烟草Tobacco

021113

4 x 44K

43,803

UniGene (Build 11), Jul 2008TIGR (Release 3), Sept 2006IGR Plant Transcript Assemblies (Release 5), Jun 2007

番茄Tomato

022270

4 x 44K

43,803

RefSeq (Release 31), Sep 2008UniGene (Build 33), Oct 2008TIGR Plant Transcript Assemblies (Release 5), Jul 2008IGR Gene Indices (Release 12), Jul 2008

小麦Wheat

022297

4 x 44K

43,803

RefSeq (Release 31), Sep 2008UniGene (Build 53), Oct 2008TIGR Plant Transcript Assemblies (Release 5), Jul 2008TIGR Gene Indices (Release 11), Jul 2008

非洲爪蟾Xenopus

V2: 023448

4 x 44K

43,803

RefSeq (Release 35), May 2009TIGR (Release 10.1), Jul 2008UniGene (Build 86), Dec 2008

酵母Yeast

V1: 015072

V2: 016322

V1: 4x44K

V2 : 8x15K

6,256+ S. Cerevisiae (S288C strain)

SGD, Jan 2004

斑马鱼Zebrafish

V3: 026437

4 x 44K V3

43,803

RefSeq (Release 38), Nov 2009Unigene (Release 117), Sep 2009TIGR ZGI (Release 17), Sep 2006Ensembl (Release 56), Sep 2009UCSC mRNA (genbank), Nov 2009Entrex gene, Dec 2009GO, Dec 2009

表达谱数据分析结果展示,请参看链接 http://bioservices.capitalbio.com/swsxh/bdpxpsjjcfx/21310.shtml